[clamav-users] Compiling error: /usr/lib/libxml2.so: error adding symbols: File in wrong format

Shawn Webb swebb at sourcefire.com
Thu May 8 08:00:08 UTC 2014 

No worries. Since I'm most familiar with more conventional Linux
distributions, I'm not entirely sure what's going on, but it appears your
compiler/linker is still trying to link against the 32bit libraries rather
than the 64bit ones: -Wl,-rpath -Wl,/usr/lib64/../lib64 -Wl,-rpath
-Wl,/usr/lib64/../lib -Wl,-rpath -Wl,/usr/lib64/../lib64 -Wl,-rpath
-Wl,/usr/lib64/../lib -L/usr/lib /usr/lib/libxml2.so -lz -L/usr/lib64

By specifying -L/usr/lib/libxml2.so, that forces the compiler/linker to
attempt link against that library (the 32bit one). Instead, it should be
linking against libxml2 by using -lxml2. I'm the only member of the team
awake at this hour tonight (it's 4am here). I'll bring it up with the team
first thing in the morning and see what they think. I'm sure we can get a
patch out to you soon.

Thanks,

Shawn


On Thu, May 8, 2014 at 3:49 AM, Alexander Tampermeier <
alexander at tampermeier.at> wrote:

> Shawn,
>
> I am very sorry. Obviously I mixed something up totally.
>
> Here is the corrected output of the configure command (now including
> option --disable-silent-rules): http://de.pastebin.de/124760
>
> And here is the corrected output of the make command:
> http://de.pastebin.de/124761
>
> Regards
> Alexander
>
>
> Am 08.05.2014 09:29, schrieb Shawn Webb:
>
>> Did you add the --disable-silent-rules to your ./configure run? It looks
>> like step 3 is still producing friendly output.
>>
>>
>> On Thu, May 8, 2014 at 3:21 AM, Alexander Tampermeier <
>>
>> alexander at tampermeier.at> wrote:
>>
>>  Hello Shawn,
>>>
>>> I executed 'make clean distclean'.
>>>
>>> I pasted the output of command #2 (CC="gcc ${BUILD64}" ./configure ...)
>>> at
>>> http://de.pastebin.de/124756
>>>
>>> Output of command #3 (make) is pasted at http://de.pastebin.de/124757
>>>
>>> Regards
>>> Alexander
>>>
>>>
>>> Am 08.05.2014 08:40, schrieb Shawn Webb:
>>>
>>>  Can you run these commands, and paste the output of commands 2 and 3 to
>>>> your pastebin service (friendly remember to pipe stderr to stdout):
>>>>
>>>> 1. make clean distclean
>>>> 2. CC="gcc ${BUILD64}" ./configure --prefix=/usr
>>>> --sysconfdir=/etc/clamav
>>>>
>>>> --with-zlib=/usr --with-dbdir=/usr/share/clamav --disable-silent-rules
>>>> 3. make
>>>>
>>>> Thanks,
>>>>
>>>> Shawn
>>>>
>>>>
>>>> On Thu, May 8, 2014 at 2:33 AM, Alexander Tampermeier <
>>>>
>>>> alexander at tampermeier.at> wrote:
>>>>
>>>>   Hello Shawn,
>>>>
>>>>> thank you for your response.
>>>>>
>>>>> This is output of 'file /usr/lib/libxml2.so':
>>>>> /usr/lib/libxml2.so: symbolic link to `libxml2.so.2.9.1'
>>>>>
>>>>> And 'file /usr/lib/libxml2.so.2.9.1' outputs:
>>>>> /usr/lib/libxml2.so.2.9.1: ELF 32-bit LSB shared object, Intel 80386,
>>>>> version 1 (SYSV), dynamically linked, not stripped
>>>>>
>>>>> As my box is cross compiled x86/x64 there are also 64bit libraries, so
>>>>> that 'file /usr/lib64/libxml2.so' gives:
>>>>> /usr/lib64/libxml2.so: symbolic link to `libxml2.so.2.9.1'
>>>>>
>>>>> And file 'file /usr/lib64/libxml2.so.2.9.1' outputs:
>>>>> /usr/lib64/libxml2.so.2.9.1: ELF 64-bit LSB shared object, x86-64,
>>>>> version
>>>>> 1 (SYSV), dynamically linked, not stripped
>>>>>
>>>>> This is my configure command (building 64bit):
>>>>> CC="gcc ${BUILD64}" ./configure --prefix=/usr --sysconfdir=/etc/clamav
>>>>> --with-zlib=/usr --with-dbdir=/usr/share/clamav
>>>>>
>>>>> Where 'echo ${BUILD64}' outputs:
>>>>> -m64
>>>>>
>>>>> I pasted the content of my config.log at http://de.pastebin.de/124754
>>>>>
>>>>> Regards
>>>>> Alexander
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> Am 08.05.2014 07:52, schrieb Shawn Webb:
>>>>>
>>>>>   What's the output of this command: file /usr/lib/libxml2.so
>>>>>
>>>>>> Can you paste (preferably to a pastebin service) your config.log? What
>>>>>> options did you pass to ./configure?
>>>>>>
>>>>>>
>>>>>> On Thu, May 8, 2014 at 1:48 AM, Alexander Tampermeier <
>>>>>> alexander at tampermeier.at> wrote:
>>>>>>
>>>>>>    I have been using ClamAV on my Linux box (Cross Compiled Linux from
>>>>>>
>>>>>>  Scratch; gcc 4.8.2) for years now and it always compiled well.
>>>>>>>
>>>>>>> Now, compiling version 0.98.3 (and also in 0.98.2) I get the
>>>>>>> following
>>>>>>> compiling error:
>>>>>>>
>>>>>>>      CC     libclamav_la-fp_sqr_comba_8.lo
>>>>>>>      CC     libclamav_la-fp_sqr_comba_9.lo
>>>>>>>      CC     libclamav_la-fp_sqr_comba_generic.lo
>>>>>>>      CC     libclamav_la-fp_sqr_comba_small_set.lo
>>>>>>>      CC     libclamav_la-fp_sqrmod.lo
>>>>>>>      CC     libclamav_internal_utils_la-str.lo
>>>>>>>      CC     libclamav_internal_utils_la-crypto.lo
>>>>>>>      CC     libclamav_internal_utils_la-iowrap.lo
>>>>>>>      CC     libclamav_internal_utils_la-others_common.lo
>>>>>>>      CC     libclamav_internal_utils_la-qsort.lo
>>>>>>>      CC     libclamav_internal_utils_la-regcomp.lo
>>>>>>>      CC     libclamav_internal_utils_la-regerror.lo
>>>>>>>      CC     libclamav_internal_utils_la-regexec.lo
>>>>>>>      CC     libclamav_internal_utils_la-regfree.lo
>>>>>>>      CCLD   libclamav_internal_utils.la
>>>>>>>      CCLD   libclamav.la
>>>>>>> /usr/lib/libxml2.so: error adding symbols: File in wrong format
>>>>>>> collect2: error: ld returned 1 exit status
>>>>>>> Makefile:969: recipe for target 'libclamav.la' failed
>>>>>>> make[4]: *** [libclamav.la] Error 1
>>>>>>> make[4]: Leaving directory '/j/development/clamav-0.98.3/libclamav'
>>>>>>> Makefile:3011: recipe for target 'all-recursive' failed
>>>>>>> make[3]: *** [all-recursive] Error 1
>>>>>>> make[3]: Leaving directory '/j/development/clamav-0.98.3/libclamav'
>>>>>>> Makefile:893: recipe for target 'all' failed
>>>>>>> make[2]: *** [all] Error 2
>>>>>>> make[2]: Leaving directory '/j/development/clamav-0.98.3/libclamav'
>>>>>>> Makefile:649: recipe for target 'all-recursive' failed
>>>>>>> make[1]: *** [all-recursive] Error 1
>>>>>>> make[1]: Leaving directory '/j/development/clamav-0.98.3'
>>>>>>> Makefile:477: recipe for target 'all' failed
>>>>>>> make: *** [all] Error 2
>>>>>>>
>>>>>>> Does anybody know how to get around this? I already recompiled
>>>>>>> libxml2
>>>>>>> (v2.9.1) but the error persists.
>>>>>>> ClamAV v0.98.1 still compiles perfectly.
>>>>>>>
>>>>>>> Regards
>>>>>>> Alexander
>>>>>>> _______________________________________________
>>>>>>> Help us build a comprehensive ClamAV guide:
>>>>>>> https://github.com/vrtadmin/clamav-faq
>>>>>>> http://www.clamav.net/support/ml
>>>>>>>
>>>>>>>    _______________________________________________
>>>>>>>
>>>>>>>  Help us build a comprehensive ClamAV guide:
>>>>>> https://github.com/vrtadmin/clamav-faq
>>>>>> http://www.clamav.net/support/ml
>>>>>>
>>>>>>
>>>>>>   _______________________________________________
>>>>>>
>>>>> Help us build a comprehensive ClamAV guide:
>>>>> https://github.com/vrtadmin/clamav-faq
>>>>> http://www.clamav.net/support/ml
>>>>>
>>>>>   _______________________________________________
>>>>>
>>>> Help us build a comprehensive ClamAV guide:
>>>> https://github.com/vrtadmin/clamav-faq
>>>> http://www.clamav.net/support/ml
>>>>
>>>>
>>>>  _______________________________________________
>>> Help us build a comprehensive ClamAV guide:
>>> https://github.com/vrtadmin/clamav-faq
>>> http://www.clamav.net/support/ml
>>>
>>>  _______________________________________________
>> Help us build a comprehensive ClamAV guide:
>> https://github.com/vrtadmin/clamav-faq
>> http://www.clamav.net/support/ml
>>
>>
> _______________________________________________
> Help us build a comprehensive ClamAV guide:
> https://github.com/vrtadmin/clamav-faq
> http://www.clamav.net/support/ml
>

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